The detailed information of tRNA gene sequence


Sequence ID>C162000071
Genome IDCP013854
Search identical group
Phylum/ClassActinomycetota
SpeciesPseudonocardia sp. HH130630-07 [CP013854]
Start position on genome 3852143
End posion on genome 3852050
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acccagacct
tRNA gene sequence 
GGAGGCGTATGGGTGCCTGGTGGCCCCCGCGGTCTTCAACACCGACGTGGCCGAGCACCT
CGGCCAGGCGGGTTCGATTCCCGTCCGCCTCCGCag
Downstream region at tRNA end position 
aacggcacct
Secondary structure (Cloverleaf model)
>C162000071	SeC	TCA
                   t      GCag aacggcacct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    A     T G C C C     A
      C C G        T      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       C C C C
      T G G        C     CGTGGCCGAGCACCTCGGCCAG
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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