The detailed information of tRNA gene sequence


Sequence ID>C162000026
Genome IDCP011272
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPirellula sp. SH-Sr6A [CP011272]
Start position on genome 6057131
End posion on genome 6057217
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaacttat
tRNA gene sequence 
GGAAGGTAGCCGGATATGGTTTGCCGGGCCTGTTTGCTAAACAGTGCAACGTAAAAGTTG
TGAGGGTTCAACTCCCTTGCCTTCCGCtc
Downstream region at tRNA end position 
cgttggctca
Secondary structure (Cloverleaf model)
>C162000026	Ser	GCT
                   t      GCtc cgttggctca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T + G          T C
                    A     T T C C C     A
    T A T A        G      + | | | |     A
  G         G G C C       G A G G G     C
  G         | | | |                 T T
  T         C C G G
    T T G          G     GCAACGTAAAAGTTGT
                    C   T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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