The detailed information of tRNA gene sequence


Sequence ID>C162000127
Genome IDFP929056
Search identical group
Phylum/ClassSynergistota
SpeciesFretibacterium fastidiosum SGP1 [FP929056]
Start position on genome 196682
End posion on genome 196779
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcagtttc
tRNA gene sequence 
GGAGGTGAGATTCGTCTGGTGACGGGCCCGGGCTTCAAACCCGGTGAGGGGCGGTTTTCG
CCGTCTCTGGTGGGTTCGATCCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
cttcgttcgg
Secondary structure (Cloverleaf model)
>C162000127	SeC	TCA
                   c      GCCA cttcgttcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     A   A          C T
                    G     C A C C C     A
      T C T        A      | | | | |     G
    G       G C T T       G T G G G     C
    G       | | + +                 T T
    T       C G G G
      G A          C     TGAGGGGCGGTTTTCGCCGTCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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