The detailed information of tRNA gene sequence


Sequence ID>W121005231
Genome IDAFSJ01000001
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P2-Fiji [AFSJ]
Start position on genome 25388
End posion on genome 25314
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgacaaaagT
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGCTGGTCTCCAAAACCAGATGTCAGGGGTTCGAGT
CCTCTAGAGCGCGTaa
Downstream region at tRNA end position 
ataataattg
Secondary structure (Cloverleaf model)
>W121005231	Trp	CCA
                   T      GTaa ataataattg
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T G
                    T     T C T C C     A
      T G A        A      | | + | |     G
    T       C T T G       A G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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