The detailed information of tRNA gene sequence


Sequence ID>W121005276
Genome IDAFSJ01000609
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P2-Fiji [AFSJ]
Start position on genome 1315
End posion on genome 1390
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tagaacttcT
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTCAGAGCATCCGCCTGTCGAGCGGAAAGTCGCGGGTTCGAG
TCTCGTCAGCCTCGTtg
Downstream region at tRNA end position 
ttatacgaaa
Secondary structure (Cloverleaf model)
>W121005276	Asp	GTC
                   T      GTtg ttatacgaaa
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | + |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AAGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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