The detailed information of tRNA gene sequence


Sequence ID>W121005286
Genome IDAFSJ01009743
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P2-Fiji [AFSJ]
Start position on genome 562
End posion on genome 633
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tcgatatgca
tRNA gene sequence 
GCGTCGATGGTGTAACGGTTAGCATTGGTGCCTTCCAAGCACTAGTTCCGGGTTCGACTC
CCGGTCGACGCAtat
Downstream region at tRNA end position 
aaattttagt
Secondary structure (Cloverleaf model)
>W121005286	Gly	TCC
                   a      Atat aaattttagt
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T          T C
                    T     G G C C C     A
      C A A        G      | | | | |     G
    G       T G T G       C C G G G     C
    G       + | | +                 T T
    T       G C A T
      T A          T     AGTT
                    G + T
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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