The detailed information of tRNA gene sequence


Sequence ID>W121005294
Genome IDAFSK01000039
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P3-Solomon [AFSK]
Start position on genome 9653
End posion on genome 9570
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtaatatagc
tRNA gene sequence 
GGGGGTGTGGCGGAATGGTAGACGCTGCGGACTTAAAATCCGTTGACCTTAAAAGTCGTG
AGGGTTCAAGTCCCTCCACCCCCAtat
Downstream region at tRNA end position 
ctgagggcta
Secondary structure (Cloverleaf model)
>W121005294	Leu	TAA
                   c      Atat ctgagggcta
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGACCTTAAAAGTCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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