The detailed information of tRNA gene sequence


Sequence ID>W121005310
Genome IDAFSK01000160
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P3-Solomon [AFSK]
Start position on genome 1698
End posion on genome 1610
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatagctacT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCGGTCTTGAAAACCGCATCACCTGTAAGGGTG
ACGGGGGTTCAAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
cctcaacagg
Secondary structure (Cloverleaf model)
>W121005310	Ser	TGA
                   T      GTtt cctcaacagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     ATCACCTGTAAGGGTGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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