The detailed information of tRNA gene sequence


Sequence ID>W121005318
Genome IDAFSK01000390
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P3-Solomon [AFSK]
Start position on genome 4495
End posion on genome 4424
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatattacaa
tRNA gene sequence 
CGCAGTGTAGCATAAGGGTAATGCGCTTGCCTCATAAGCAAGAAAATATGGGTTCGAGTC
CCATCGCTGCGAtgg
Downstream region at tRNA end position 
aattttagtt
Secondary structure (Cloverleaf model)
>W121005318	Met	CAT
                   a      Atgg aattttagtt
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     T A C C C     A
        A A        A      | | | | |     G
      G     T A C G       A T G G G     C
      G     | | | |                 T T
      G     A T G C
        T A        G     AAAAT
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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