The detailed information of tRNA gene sequence


Sequence ID>W121005321
Genome IDAFSK01000407
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P3-Solomon [AFSK]
Start position on genome 4177
End posion on genome 4258
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
taactgaatc
tRNA gene sequence 
GGGCGGATGGCGAAATTGGTAGACGCACCACACTCAAAATGTGGCGGCCACGGTCATGAG
AGTTCGAGTCTCTCTCTGCCCAtag
Downstream region at tRNA end position 
gtaaaataga
Secondary structure (Cloverleaf model)
>W121005321	Leu	CAA
                   c      Atag gtaaaataga
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     A - T          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       A G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGCCACGGTCAT
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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