The detailed information of tRNA gene sequence


Sequence ID>W121006714
Genome IDAFXB01000010
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSAR116 cluster alpha proteobacterium HIMB100 [AFXB]
Start position on genome 1055348
End posion on genome 1055424
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttctaaccaa
tRNA gene sequence 
GGCCTCGTAGCTCATCAGGATAGAGCGACAGATTCCTAATCTGTAGGTAGCAGGTTCGAG
TCCTGCCGAGGTCACCA
Downstream region at tRNA end position 
tttcaattta
Secondary structure (Cloverleaf model)
>W121006714	Arg	CCT
                   a      ACCA tttcaattta
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C T A        A      | | | | |     G
    A       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTA
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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