The detailed information of tRNA gene sequence


Sequence ID>W121008662
Genome IDAGCQ01000001
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 817611
End posion on genome 817520
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaaaaact
tRNA gene sequence 
GGAGAGGTGGCCGAGTCGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATAGGGGCAAAACC
TCTATCGTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
tagaccggga
Secondary structure (Cloverleaf model)
>W121008662	Ser	GCT
                   t      GCtt tagaccggga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATAGGGGCAAAACCTCTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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