The detailed information of tRNA gene sequence


Sequence ID>W121008663
Genome IDAGCQ01000001
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 395726
End posion on genome 395641
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatcaaatc
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGTCGAATCGGCACGACTGGAAATCGTGTGTGGCGTCAGCCACC
GTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
tttatattat
Secondary structure (Cloverleaf model)
>W121008663	Ser	GGA
                   c      GCtt tttatattat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      C G A        G     TGTGGCGTCAGCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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