The detailed information of tRNA gene sequence


Sequence ID>W121008672
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 1736120
End posion on genome 1736193
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaagaaaat
tRNA gene sequence 
GGGGCTATAGCTCAACTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTTTGCGGTTCAAGT
CCGCATAGCTCCACtt
Downstream region at tRNA end position 
ctgggaagag
Secondary structure (Cloverleaf model)
>W121008672	Ala	TGC
                   t      ACtt ctgggaagag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     A C G C C     A
      C A A        A      | | | | |     A
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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