The detailed information of tRNA gene sequence


Sequence ID>W121008683
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 3256980
End posion on genome 3257054
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aatcttcaat
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGCAGCGCGTGCGGTTCGGGACCGTAAGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACtt
Downstream region at tRNA end position 
tttatttact
Secondary structure (Cloverleaf model)
>W121008683	Pro	CGG
                   t      ACtt tttatttact
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        G     AGGTC
                    T - A
                    G + T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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