The detailed information of tRNA gene sequence


Sequence ID>W121008686
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 3845467
End posion on genome 3845391
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttgaatttat
tRNA gene sequence 
GGGGCGGTAGCTCAGTTGGTTAGAGCGCTACGTTGACATCGTAGAGGTCGGGAGTTCGAA
TCCCCCCCGTCCCACCG
Downstream region at tRNA end position 
tgaaccacgg
Secondary structure (Cloverleaf model)
>W121008686	Val	GAC
                   t      ACCG tgaaccacgg
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        A      | | |   |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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