The detailed information of tRNA gene sequence


Sequence ID>W121008692
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 3262423
End posion on genome 3262347
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ataaaatgat
tRNA gene sequence 
CGGAGCGTGGCGCAGCCTGGTAGCGCACTTGAATGGGGTTCAAGGGGTCGCTGGTTCAAA
TCCAGTCGCTCCGACCG
Downstream region at tRNA end position 
aaaaggggat
Secondary structure (Cloverleaf model)
>W121008692	Pro	GGG
                   t      ACCG aaaaggggat
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        G      + | | | |     A
    C       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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