The detailed information of tRNA gene sequence


Sequence ID>W121008696
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 1876777
End posion on genome 1876703
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
aaaatcacgt
tRNA gene sequence 
GCGCCCGTAGCTCAACTGGATAGAGCGTTTGGCTACGGACCAAAAGGTTGGGGGTTCGAG
TCCTCCCGGGCGTACtt
Downstream region at tRNA end position 
tagcccctca
Secondary structure (Cloverleaf model)
>W121008696	Arg	ACG
                   t      ACtt tagcccctca
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTT
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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