The detailed information of tRNA gene sequence


Sequence ID>W121008698
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 1349478
End posion on genome 1349394
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctgctcaaca
tRNA gene sequence 
GCCGGAGTGGTGGAATTGGCAGACGCGCTGGACTCAAAATCCAGTGCCCTTCGGGGCGTG
TCGGTTCGAGTCCGACCTCCGGCACtt
Downstream region at tRNA end position 
aaagcccggc
Secondary structure (Cloverleaf model)
>W121008698	Leu	CAA
                   a      ACtt aaagcccggc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      C A G        G     TGCCCTTCGGGGCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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