The detailed information of tRNA gene sequence


Sequence ID>W121008699
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 1349264
End posion on genome 1349191
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttattgagtt
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCACCAGAATCGCACTCTGGGGGTCGGGAGTTCGAAT
CTCCTCGGCTCCACtt
Downstream region at tRNA end position 
ttttttatgg
Secondary structure (Cloverleaf model)
>W121008699	Ala	CGC
                   t      ACtt ttttttatgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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