The detailed information of tRNA gene sequence


Sequence ID>W121009980
Genome IDAGGA01000220
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P4-Papua_New_Guinea [AGGA]
Start position on genome 1200
End posion on genome 1123
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgttgtttgT
tRNA gene sequence 
GGTGCTGTAGGCAAATTGGTAAAGCCCTCTGTCTTTCACGCAGATGTTTGCGGGTTCAAG
TCCCGTCAGCACTGTCA
Downstream region at tRNA end position 
gaattgttta
Secondary structure (Cloverleaf model)
>W121009980	Glu	TTC
                   T      GTCA gaattgttta
                     G + T
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       A C G G       G C G G G     C
    G         | | |                 T T
    G       A G C C
      T A A        C     TGTTT
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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