The detailed information of tRNA gene sequence


Sequence ID>W121009993
Genome IDAGGA01000384
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P4-Papua_New_Guinea [AGGA]
Start position on genome 1650
End posion on genome 1562
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgtagcagT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCACCCTGCTAAGGTGTTAGGTCTGTATGGGCC
TCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
tataagggcg
Secondary structure (Cloverleaf model)
>W121009993	Ser	GCT
                   T      GTtt tataagggcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TAGGTCTGTATGGGCCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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