The detailed information of tRNA gene sequence


Sequence ID>W121010006
Genome IDAGGA01000804
Search identical group
Phylum/ClassUnclassified
Speciessea squirt metagenome P4-Papua_New_Guinea [AGGA]
Start position on genome 220
End posion on genome 315
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGATCGTCGTCTCCGGTGAGGTCGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCG
GTCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaatgcctct
Secondary structure (Cloverleaf model)
>W121010006	SeC	TCA
                   c      GCCA aaatgcctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       |   | |                 T T
    T       G T C G
      G A G        G     TTGGGGCCGCCAGCGGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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