The detailed information of tRNA gene sequence


Sequence ID>W121017589
Genome IDAGRW01000029
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema saccharophilum DSM 2985 [AGRW]
Start position on genome 320
End posion on genome 394
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcattccgcT
tRNA gene sequence 
GGGACATTAGCTCAGCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCTAGGTTCAAAT
CCTAGATGTCCCATgt
Downstream region at tRNA end position 
aatttttgcc
Secondary structure (Cloverleaf model)
>W121017589	Met	CAT
                   T      ATgt aatttttgcc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     T - A          T A
                    T     G A T C C     A
      C G A        A      | | | | |     A
    G       C T C G       C T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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