The detailed information of tRNA gene sequence


Sequence ID>W121017610
Genome IDAGRW01000043
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema saccharophilum DSM 2985 [AGRW]
Start position on genome 36227
End posion on genome 36153
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttcgttcga
tRNA gene sequence 
GCGTGGTTAGCTCAGCGGTAGAGCATCGCCTTCACACGGCGGGGGTCATTGGTTCAAACC
CAATACCACGTACCA
Downstream region at tRNA end position 
ttttttatgc
Secondary structure (Cloverleaf model)
>W121017610	Val	CAC
                   a      ACCA ttttttatgc
                     G + T
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          C A
                    T     T A A C C     A
        G A        A      | | | | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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