The detailed information of tRNA gene sequence


Sequence ID>W121017782
Genome IDAGSB01000058
Search identical group
Phylum/ClassAcidobacteriota
SpeciesHolophaga foetida DSM 6591 [AGSB]
Start position on genome 84020
End posion on genome 84096
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagactttcc
tRNA gene sequence 
GGCTGGGTAGCTCAGGTGGTTAGAGCGAGGGTCTCATAATCCCTAGGTCGACAGTTCGAG
TCTGTCTCCAGCCACCA
Downstream region at tRNA end position 
ccgaaggaaa
Secondary structure (Cloverleaf model)
>W121017782	Met	CAT
                   c      ACCA ccgaaggaaa
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G + T          T G
                    T     C T G T C     A
      G G A        A      | | | | |     G
    T       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    T   T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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