The detailed information of tRNA gene sequence


Sequence ID>W121023797
Genome IDAHBC01000056
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas sp. GFAJ-1 [AHBC]
Start position on genome 39516
End posion on genome 39589
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgacttgtta
tRNA gene sequence 
GGCTGGATGGCAGAGTGGTTATGCAGCGGACTGCAACTCCGTGTACGCCGGTTCGATTCC
GACTCCAGCCTCCA
Downstream region at tRNA end position 
ttttcagtgt
Secondary structure (Cloverleaf model)
>W121023797	Cys	GCA
                   a      TCCA ttttcagtgt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     A - T          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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