The detailed information of tRNA gene sequence


Sequence ID>W121025003
Genome IDAHCA01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas haloplanktis ATCC 14393 [AHCA]
Start position on genome 3422
End posion on genome 3349
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccggttttgg
tRNA gene sequence 
GGCGGAATGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTCCACCTCGGTTCGACTCC
GGGTTCCGCCTCCA
Downstream region at tRNA end position 
ttcaacgctc
Secondary structure (Cloverleaf model)
>W121025003	Cys	GCA
                   g      TCCA ttcaacgctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     CCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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