The detailed information of tRNA gene sequence


Sequence ID>W121031626
Genome IDAHGV01000001
Search identical group
Phylum/ClassSynergistota
SpeciesThermanaerovibrio velox DSM 12556 [AHGV]
Start position on genome 826313
End posion on genome 826408
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggtcccgagc
tRNA gene sequence 
GGAGGTGAGTCGTAGCTGGTGCTGCGCCCAGGCTTCAAACCTGGTGGGGGTCGGTAGGCC
GGTCCCGGTGGGTTCGATTCCCACGCGCCTCCGCCA
Downstream region at tRNA end position 
gagtcgagaa
Secondary structure (Cloverleaf model)
>W121031626	SeC	TCA
                   c      GCCA gagtcgagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     A   G          T T
                    G     C A C C C     A
      T C G        T      | | | | |     G
    G       A T G C       G T G G G     C
    G       | + | |                 T T
    T       T G C G
      G C          C     TGGGGGTCGGTAGGCCGGTCCCG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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