The detailed information of tRNA gene sequence


Sequence ID>W121033257
Genome IDAHIR01000048
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas echinoides ATCC 14820 [AHIR]
Start position on genome 61330
End posion on genome 61406
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaggcgcgg
tRNA gene sequence 
GGGCCTGTAGCTCAACTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tgtcgcaccg
Secondary structure (Cloverleaf model)
>W121033257	Met	CAT
                   g      ACCA tgtcgcaccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK