The detailed information of tRNA gene sequence


Sequence ID>W121033285
Genome IDAHIS01000083
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. PAMC 26605 [AHIS]
Start position on genome 12920
End posion on genome 12996
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggggccac
tRNA gene sequence 
GGCGAAGTAGCTCAGTTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAG
TCCCTCCTTCGCTACCA
Downstream region at tRNA end position 
tcgctgtcac
Secondary structure (Cloverleaf model)
>W121033285	Met	CAT
                   c      ACCA tcgctgtcac
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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