The detailed information of tRNA gene sequence


Sequence ID>W121033289
Genome IDAHIS01000095
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. PAMC 26605 [AHIS]
Start position on genome 244633
End posion on genome 244557
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagcgggcgg
tRNA gene sequence 
GGGCCTGTAGCTCAACTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
ttccccttca
Secondary structure (Cloverleaf model)
>W121033289	Met	CAT
                   g      ACCA ttccccttca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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