The detailed information of tRNA gene sequence


Sequence ID>W121061392
Genome IDAJGU01000002
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. JC4 [AJGU]
Start position on genome 171416
End posion on genome 171487
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acacagtttt
tRNA gene sequence 
GGTGTGGTACCCAAGCGGTAAGGGATCGGTCTGCAAAACCGTCATTGGTTGGTTCGACTC
CAATCCACACCTgag
Downstream region at tRNA end position 
agaataaaaa
Secondary structure (Cloverleaf model)
>W121061392	Cys	GCA
                   t      Tgag agaataaaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A A C C     A
        G A        A      + | | | |     G
      C     A C C C       G T T G G     C
      G       | | |                 T T
      G     A G G G
        T A        A     CATTG
                    T   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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