The detailed information of tRNA gene sequence


Sequence ID>W121061398
Genome IDAJGU01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. JC4 [AJGU]
Start position on genome 78689
End posion on genome 78771
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccaaacattc
tRNA gene sequence 
GCCGGAGTGGTGGAATGGTAGACACGAAAGACTCAAAATCTTTTGTCAGCGATGGCGTAA
GAGTTCAAGTCTCTTCTCCGGTAtac
Downstream region at tRNA end position 
gaacgtcgta
Secondary structure (Cloverleaf model)
>W121061398	Leu	CAA
                   c      Atac gaacgtcgta
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T T C T C     A
      T A A        G      | | | | |     A
    G       G G T G       A A G A G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGTCAGCGATGGCGT
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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