The detailed information of tRNA gene sequence


Sequence ID>W121061407
Genome IDAJGU01000013
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. JC4 [AJGU]
Start position on genome 7300
End posion on genome 7213
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttacctatT
tRNA gene sequence 
GGAGCGATACCAAAGCGGTCGTACTGGGGCGGTCTTGAAAACCGTTGTAGCGCAAGTTAC
CGGGGGTTCGAATCCCTCTCGCTCCGAta
Downstream region at tRNA end position 
aaactggaaa
Secondary structure (Cloverleaf model)
>W121061407	Ser	TGA
                   T      GAta aaactggaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
    G C G A        A      | + | | |     G
  G         A A C C       G G G G G     C
  T           | | |                 T T
  C         C T G G
    G T A          G     TGTAGCGCAAGTTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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