The detailed information of tRNA gene sequence


Sequence ID>W121061410
Genome IDAJGU01000015
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. JC4 [AJGU]
Start position on genome 22908
End posion on genome 22980
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tataaaaatc
tRNA gene sequence 
GGGCCATTAGCTCAGCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCTTGGTTCAAAT
CCAAGATGGCCCAaga
Downstream region at tRNA end position 
cgaatgccta
Secondary structure (Cloverleaf model)
>W121061410	Met	CAT
                   c      Aaga cgaatgccta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     G A A C C     A
      C G A        A      | | | | |     A
    G       C T C G       C T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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