The detailed information of tRNA gene sequence


Sequence ID>W121061414
Genome IDAJGU01000027
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. JC4 [AJGU]
Start position on genome 12924
End posion on genome 12996
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actcacttac
tRNA gene sequence 
GGCGACCTAGCTCAGTTGGTAGAGCACACGGCTCATATCCGTGATGTCAATGGTTCAATC
CCATTGGTCGCTAtcc
Downstream region at tRNA end position 
aaggtcataa
Secondary structure (Cloverleaf model)
>W121061414	Met	CAT
                   c      Atcc aaggtcataa
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G          C T
                    T     T T A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     ATGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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