The detailed information of tRNA gene sequence


Sequence ID>W121061423
Genome IDAJGU01000063
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. JC4 [AJGU]
Start position on genome 2343
End posion on genome 2255
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccacctataT
tRNA gene sequence 
GGAGAGATGGCAGAGAGGCCGAATGCGGTAGCATGCTAAGCTGTTATAGCGGTAACGCTA
TCGGGGGTTCAAATCCCTCTCTCTCCGTta
Downstream region at tRNA end position 
gtattcaatc
Secondary structure (Cloverleaf model)
>W121061423	Ser	GCT
                   T      GTta gtattcaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        G     TATAGCGGTAACGCTATC
                    G + T
                    T + G
                    A - T
                    G - C
                    C - G
                  A       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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