The detailed information of tRNA gene sequence


Sequence ID>W121069439
Genome IDAJVT01000246
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli O111:H11 str. CVM9545 [AJVT]
Start position on genome 77
End posion on genome 154
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaacaatct
tRNA gene sequence 
GGCTACGTAGTCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGA
ATCCCGTCGTAGCCACCA
Downstream region at tRNA end position 
aattctgaat
Secondary structure (Cloverleaf model)
>W121069439	Met	CAT
                   t      ACCA aattctgaat
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T G A C        A      | |   | |     G
  T         T C T G       A C A G G     C
  G         +   + |                 T T
  G         G A G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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