The detailed information of tRNA gene sequence


Sequence ID>W121081979
Genome IDAKGD01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHydrocarboniphaga effusa AP103 [AKGD]
Start position on genome 584448
End posion on genome 584524
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccccaagat
tRNA gene sequence 
GGTGATGTAGCTCAGACGGTTAGAGCGCGGCACTCATAATGCTGAGGTCGGTGGTTCGAT
TCCACTCATCACCACCA
Downstream region at tRNA end position 
gtaactcctt
Secondary structure (Cloverleaf model)
>W121081979	Met	CAT
                   t      ACCA gtaactcctt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T C A C C     A
      A G A        A      + | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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