The detailed information of tRNA gene sequence


Sequence ID>W121114063
Genome IDALPD01000050
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus sp. W4 [ALPD]
Start position on genome 7742
End posion on genome 7830
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataacctgtT
tRNA gene sequence 
GGAGGGGTGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTGTCTGCAAGGGCA
CCGTGGGTTCGAATCCCACCCCCTCCGTtc
Downstream region at tRNA end position 
taatcactaa
Secondary structure (Cloverleaf model)
>W121114063	Ser	TGA
                   T      GTtc taatcactaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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