The detailed information of tRNA gene sequence


Sequence ID>W121112422
Genome IDALKN01000014
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesLimnohabitans sp. Rim28 [ALKN]
Start position on genome 47179
End posion on genome 47254
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccaggttat
tRNA gene sequence 
GACCCTATCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACCGGGGTTCGAAT
CCCCGTAGGGTCGCCA
Downstream region at tRNA end position 
agttttgtag
Secondary structure (Cloverleaf model)
>W121112422	Glu	TTC
                   t      GCCA agttttgtag
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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