The detailed information of tRNA gene sequence


Sequence ID>W121024866
Genome IDAHBZ01000005
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas citrea NCIMB 1889 [AHBZ]
Start position on genome 175106
End posion on genome 175182
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgtcattgc
tRNA gene sequence 
AGGGGCGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGCGGGTTCGAG
TCCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
cttccttttt
Secondary structure (Cloverleaf model)
>W121024866	Trp	CCA
                   c      GCCA cttccttttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      A A C        A      | | + | |     G
    T       C T T G       G C G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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