The detailed information of tRNA gene sequence


Sequence ID>W121030301
Genome IDAHFX01000058
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. 2009V-1046 [AHFX]
Start position on genome 139281
End posion on genome 139357
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaagtcgga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
atctctctta
Secondary structure (Cloverleaf model)
>W121030301	Met	CAT
                   a      ACCA atctctctta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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