The detailed information of tRNA gene sequence


Sequence ID>W121025013
Genome IDAHCA01000005
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas haloplanktis ATCC 14393 [AHCA]
Start position on genome 288990
End posion on genome 289066
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgtcattgc
tRNA gene sequence 
AGGGGCGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGGGAGTTCGAG
TCTCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tttcttcttt
Secondary structure (Cloverleaf model)
>W121025013	Trp	CCA
                   c      GCCA tttcttcttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      A A C        A      | + | | |     G
    T       C T T G       G G G A G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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