The detailed information of tRNA gene sequence


Sequence ID>W121031292
Genome IDAHGN01000011
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. 3554-08 [AHGN]
Start position on genome 127223
End posion on genome 127147
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ctcaagcgat
tRNA gene sequence 
GCGTCCGTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGGTGGTTCGAG
TCCACTCGGACGCACCA
Downstream region at tRNA end position 
tgagaagctt
Secondary structure (Cloverleaf model)
>W121031292	Val	GAC
                   t      ACCA tgagaagctt
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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