The detailed information of tRNA gene sequence


Sequence ID>W121112286
Genome IDALKJ01000048
Search identical group
Phylum/ClassBacteroidota
SpeciesPorphyromonas sp. oral taxon 279 oral taxon 279 str. F0450 [ALKJ]
Start position on genome 697
End posion on genome 607
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggctgataa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGTGTGTAAACGCCAAAAGCGT
TTCGCGGGTTCGAATCCCGCCCTCTCCGCAA
Downstream region at tRNA end position 
aaaggcttca
Secondary structure (Cloverleaf model)
>W121112286	Ser	GGA
                   a      GCAA aaaggcttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TAAACGCCAAAAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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