The detailed information of tRNA gene sequence


Sequence ID>W121024962
Genome IDAHCA01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas haloplanktis ATCC 14393 [AHCA]
Start position on genome 199778
End posion on genome 199853
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attcagatgt
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGT
CCAGTATCACCCACCA
Downstream region at tRNA end position 
ctttaattta
Secondary structure (Cloverleaf model)
>W121024962	Val	TAC
                   t      ACCA ctttaattta
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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