The detailed information of tRNA gene sequence


Sequence ID>W121061877
Genome IDAJHC01000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia conorii subsp. indica ITTR [AJHC]
Start position on genome 40557
End posion on genome 40631
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttttatttaa
tRNA gene sequence 
GCGGGTGTAGCTCAGGGGTAGAGCGCCACCTTGCCAAGGTTGAAGTCGAGGGTTCGAATC
CCTTCACCCGCTCCA
Downstream region at tRNA end position 
gtgattttat
Secondary structure (Cloverleaf model)
>W121061877	Gly	GCC
                   a      TCCA gtgattttat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
        G A        A      + | | | |     G
      G     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AAGTC
                    C - G
                    C   T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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