The detailed information of tRNA gene sequence


Sequence ID>W121033386
Genome IDAHIZ01000006
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia sibirica subsp. sibirica BJ-90 [AHIZ]
Start position on genome 42590
End posion on genome 42515
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taaaaaatat
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTAGAGTATCTCGTTTACACCGAGAGTGTCGGCGGTTCAAGT
CCGTCATCGCCCACCA
Downstream region at tRNA end position 
atcaaaagtt
Secondary structure (Cloverleaf model)
>W121033386	Val	TAC
                   t      ACCA atcaaaagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     C T G C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G C G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GTGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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